Motif View

Internal ID 18914539
Source Database TransTermHP TERM 130
Feature Type terminator
Name
Rho-independent transcription terminator TERM 130
Sequence CGCCACGCGGGAGCCTGCTCCCGCGTTGGCG
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Start 500384
End 500414
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain F9676, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGTACGCATGATC(5' tail) CGCC-ACGCGGGAG(5' stem) CCTG(loop) CTCCCGCGTTGGCG(3' stem) TGTCTGGAGGGTCCT(3' tail). Confidence: 91. gap 1, overlap 500371

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685