Motif View

Internal ID 18873479
Source Database TransTermHP TERM 493
Feature Type terminator
Name
Rho-independent transcription terminator TERM 493
Sequence GGCCGCCAGCGGTTGCCCGCCGGCGGCC
Look for more occurrences
Start 2072489
End 2072516
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa DSM 50071, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCATTCATGCAAAA(5' tail) GGCCGCCGGCGG(5' stem) GCAA(loop) CCGCTGGCGGCC(3' stem) TTTTTTTCGTACTGC(3' tail). Confidence: 100. opp_overlap 2072489

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685