Motif View

Internal ID 18675363
Source Database TransTermHP TERM 6
Feature Type terminator
Name
Rho-independent transcription terminator TERM 6
Sequence GGGGTTAGCGCAAGCTAACCCC
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Start 18281
End 18302
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain UM-01, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGACCAAAACAAAAA(5' tail) GGGGTTAGC(5' stem) TTGC(loop) GCTAACCCC(3' stem) TTGAAAAATATGGTG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685