Motif View

Internal ID 18660687
Source Database TransTermHP TERM 217
Feature Type terminator
Name
Rho-independent transcription terminator TERM 217
Sequence GGCGCCTTCGGGCGCC
Look for more occurrences
Start 973791
End 973806
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain S04 90 genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAGGATGAAAAAA(5' tail) GGCGCC(5' stem) CGAA(loop) GGCGCC(3' stem) TTTTTCCGTTGGGGG(3' tail). Confidence: 100. opp_overlap 973791

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685