Internal ID | 18657848 | Source Database | TransTermHP TERM 16 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 16
|
Sequence |
GGCCGCTGATACCAGCGGCC Look for more occurrences |
Start | 148340 |
End | 148359 |
Strand | + |
Genomic Context | Located within gene [T648_RS00625] |
Replicon | Pseudomonas aeruginosa MRSN 317 contig1, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | TCGACGTCTTCTCAA(5' tail) GGCCGCTG(5' stem) ATAC(loop) CAGCGGCC(3' stem) TTTTTTTTCGGGTTG(3' tail). Confidence: 100. |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|