Motif View

Internal ID 18656944
Source Database TransTermHP TERM 363
Feature Type terminator
Name
Rho-independent transcription terminator TERM 363
Sequence CTGGCTTGCCAG
Look for more occurrences
Start 1718160
End 1718171
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain Carb01 63, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCTTCTCAGAAAAGT(5' tail) CTGG(5' stem) CTTG(loop) CCAG(3' stem) TTTTCTTTCTTTCTC(3' tail). Confidence: 90. opp_overlap 1718160 1718159

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685