Motif View

Internal ID 18656868
Source Database TransTermHP TERM 206
Feature Type terminator
Name
Rho-independent transcription terminator TERM 206
Sequence CGAAGACCCCCTGCCGCCCTCGGGCCGCAGGGGGTCTTCG
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Start 841807
End 841846
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain Carb01 63, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCACGGGCAGACCTT(5' tail) CGAAGACCCCCTGCCGCC(5' stem) CTCG(loop) GGCCGCAGGGGGTCTTCG(3' stem) TTTTCAGGCGACGCC(3' tail). Confidence: 100. opp_overlap 841813

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685