Motif View

Internal ID 18652213
Source Database TransTermHP TERM 1064
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1064
Sequence CGCGGCCGGTGCAGCGATGCACCGGCCGCG
Look for more occurrences
Start 4713938
End 4713967
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain FRD1, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGGCCTGAGTCTCCG(5' tail) CGCGGCCGGTGCA(5' stem) GCGA(loop) TGCACCGGCCGCG(3' stem) TCGTCTTACCCGCAA(3' tail). Confidence: 100. overlap 4713936

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685