| Internal ID | 18643804 | Source Database | TransTermHP TERM 5 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 5
|
| Sequence |
TGAAAAAGGGCGGCCTAGGCCGCCCTTTTTCG Look for more occurrences |
| Start | 27950 |
| End | 27981 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTCTCTGATCCATCA(5' tail) TGAAAAAGGGCGGC(5' stem) CTAG(loop) GCCGCCCTTTTTCG(3' stem) TTTTCCCCTTCTTGG(3' tail). Confidence: 100. opp_overlap 27957, overlap 27951 27957 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|