| Internal ID | 18622627 | Source Database | TransTermHP TERM 1 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1
|
| Sequence |
GCCGGGCCGGGTTTTACCTACAGGTAAACCCGGCCCGGG Look for more occurrences |
| Start | 5506 |
| End | 5544 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGTCGACAAACGAGG(5' tail) GCCGGGCCGGGTTTTACC(5' stem) TACA(loop) GGTAAA-CCCGGCCCGGG(3' stem) TATGTCCGGGGTAAC(3' tail). Confidence: 100. gap 1, opp_overlap 5504 5501 5535, overlap 5506 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|