Motif View

Internal ID 18618470
Source Database TransTermHP TERM 16
Feature Type terminator
Name
Rho-independent transcription terminator TERM 16
Sequence TGCCGAAGTCCCGGCA
Look for more occurrences
Start 110839
End 110854
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCCGAGGTGCGTTG(5' tail) TGCCG(5' stem) AAGTCC(loop) CGGCA(3' stem) TTTTTTCCCTGTCAC(3' tail). Confidence: 90.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685