| Internal ID | 18613439 | Source Database | TransTermHP TERM 13 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 13
|
| Sequence |
TGGCGGCGCCCTCTCTTTCCCCTGGGAAAGCGGGGGCGTCGCCG Look for more occurrences |
| Start | 89016 |
| End | 89059 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGATAGCTCCGGAAA(5' tail) CGGCGACGCCCCCGCTTTCC(5' stem) CAGG(loop) GGAAAGAGAGGGCGCCGCCA(3' stem) GGGTGTGGAAAGGCT(3' tail). Confidence: 100. opp_overlap 88975, overlap 89017 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|