Motif View

Internal ID 18609950
Source Database TransTermHP TERM 64
Feature Type terminator
Name
Rho-independent transcription terminator TERM 64
Sequence GACCTCGCCGAGGCATCGGCGGGGTC
Look for more occurrences
Start 265968
End 265993
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGTCGAGACGCGAA(5' tail) GACCTCGCCGA(5' stem) GGCA(loop) TCGGCGGGGTC(3' stem) TTTCTCCGAAAGAGG(3' tail). Confidence: 100. opp_overlap 265970

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685