Motif View

Internal ID 18592227
Source Database TransTermHP TERM 24
Feature Type terminator
Name
Rho-independent transcription terminator TERM 24
Sequence GCGCCAGGCTGTCGCCTGGCGG
Look for more occurrences
Start 41015
End 41036
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_37, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCAACAGATGTGAG(5' tail) GCGCCAGGC(5' stem) TGTC(loop) GCCTGGCGG(3' stem) TTTTTCTCGTATATT(3' tail). Confidence: 100. overlap 41016

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685