Motif View

Internal ID 18544896
Source Database TransTermHP TERM 213
Feature Type terminator
Name
Rho-independent transcription terminator TERM 213
Sequence CGAGGCCCGCCCAGTTGCGGGCCTCG
Look for more occurrences
Start 759257
End 759282
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_6, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCCTCCCCAAAAAA(5' tail) CGAGGCCCGC(5' stem) AACTGG(loop) GCGGGCCTCG(3' stem) TCATCGACTGTGGAA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685