| Internal ID | 18544677 | Source Database | TransTermHP TERM 13 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 13
|
| Sequence |
GATGGAACGAAGAACCCCGGCCATGAGCCGGGGTTCTTCGTTCCGGA Look for more occurrences |
| Start | 39259 |
| End | 39305 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_47, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TATCGCTTTCAGCAA(5' tail) TCCGGAACGAAGAACCCCGGC(5' stem) TCATG(loop) GCCGGGGTTCTTCGTTCCATC(3' stem) GCAGGCGGCGCGCGT(3' tail). Confidence: 100. opp_overlap 39266 39270 39273, overlap 39270 39273 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|