| Internal ID | 18544531 | Source Database | TransTermHP TERM 18 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 18
|
| Sequence |
TGGCGGCGCCCTCTCTTTCCCCTGGGAAAGCGGGGGCGTCGCCG Look for more occurrences |
| Start | 123905 |
| End | 123948 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_35, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCCTTTCCACACCC(5' tail) TGGCGGCGCCCTCTCTTTCC(5' stem) CCTG(loop) GGAAAGCGGGGGCGTCGCCG(3' stem) TTTCCGGAGCTATCC(3' tail). Confidence: 100. opp_overlap 123935, overlap 123906 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|