Motif View

Internal ID 18535564
Source Database TransTermHP TERM 1359
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1359
Sequence CCGCCACGGCGCGCTCCGGCGCGCCATGGCGG
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Start 5592864
End 5592895
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain PSE305.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCGTCACTGATCGC(5' tail) CCGCCACGGCGCGC(5' stem) TCCG(loop) GCGCGCCATGGCGG(3' stem) TTCCTCCATTAGCGT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685