Motif View

Internal ID 18535253
Source Database TransTermHP TERM 867
Feature Type terminator
Name
Rho-independent transcription terminator TERM 867
Sequence GAAAAAGGGCGGCCTAGGCCGCCCTTTTTC
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Start 3608673
End 3608702
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain PSE305.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAAGAAGGGGAAAAC(5' tail) GAAAAAGGGCGGC(5' stem) CTAG(loop) GCCGCCCTTTTTC(3' stem) ATGATGGATCAGAGA(3' tail). Confidence: 100. opp_overlap 3608679, overlap 3608672 3608679

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685