Motif View

Internal ID 18535074
Source Database TransTermHP TERM 605
Feature Type terminator
Name
Rho-independent transcription terminator TERM 605
Sequence CGCCCTGTGTTGCCCGTTTCCCCGCCAGGGGATGCCCGGCACGCAGGGCG
Look for more occurrences
Start 2574864
End 2574913
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain PSE305.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACATGCAACGAAAA(5' tail) CGCCCTGCG-TGCCGGGCATCCCC(5' stem) TGGC(loop) GGGGAAACG-GGCAACACAGGGCG(3' stem) TGGCGGCGTGGCGCC(3' tail). Confidence: 100. overlap 2574907

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685