Motif View

Internal ID 18534820
Source Database TransTermHP TERM 224
Feature Type terminator
Name
Rho-independent transcription terminator TERM 224
Sequence GGGCATGAAACTCCATTTCCATGCCC
Look for more occurrences
Start 776913
End 776938
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain PSE305.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGGATAAAAACAAA(5' tail) GGGCATGGAA(5' stem) ATGGAG(loop) TTTCATGCCC(3' stem) TTGTCGGCTGAATGA(3' tail). Confidence: 90. opp_overlap 776913

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685