Motif View

Internal ID 18531637
Source Database TransTermHP TERM 51
Feature Type terminator
Name
Rho-independent transcription terminator TERM 51
Sequence GGCCCGCGCGTCCGCGCGGGCC
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Start 296517
End 296538
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA96.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAGCGATACCCCCGA(5' tail) GGCCCGCGC(5' stem) GTCC(loop) GCGCGGGCC(3' stem) TTTCTTTCAGAGGCT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685