Motif View

Internal ID 18528767
Source Database TransTermHP TERM 21
Feature Type terminator
Name
Rho-independent transcription terminator TERM 21
Sequence CGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCG
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Start 66104
End 66138
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA037 adkgb-supercont1.11, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGTTGCGGGTAAGA(5' tail) CGACGCGGCCGGTGCA(5' stem) TCGC(loop) TGCACCGGCCGCG-CG(3' stem) GAGGCTCAGGCCTTG(3' tail). Confidence: 100. gap 1, overlap 66107

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685