Motif View

Internal ID 18508472
Source Database TransTermHP TERM 1362
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1362
Sequence TCCGCGTTAAACTGCGCGGG
Look for more occurrences
Start 5533081
End 5533100
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO581 genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGAGAGAGGAAAAAA(5' tail) CCCGCGC(5' stem) AGTTTA(loop) ACGCGGA(3' stem) ATTGGCGGTCACGCT(3' tail). Confidence: 91. overlap 5533082

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685