Motif View

Internal ID 18507528
Source Database TransTermHP TERM 1417
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1417
Sequence CGCGGCCGGTGCAGCGATGCACCGGCCGCG
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Start 5850418
End 5850447
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa c7447m genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTGCGGGTAAGACGA(5' tail) CGCGGCCGGTGCA(5' stem) TCGC(loop) TGCACCGGCCGCG(3' stem) CGGAGACTCAGGCCT(3' tail). Confidence: 100. overlap 5850415

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685