Motif View

Internal ID 18502123
Source Database TransTermHP TERM 1412
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1412
Sequence CGGGGCCGCTTTGCGGCCCCG
Look for more occurrences
Start 6164791
End 6164811
Strand +
Genomic Context
Replicon Pseudomonas mosselii SJ10, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTAACGTGACACATC(5' tail) CGGGGCCGC(5' stem) TTT(loop) GCGGCCCCG(3' stem) CTTTTTGTTCTCAAC(3' tail). Confidence: 100. opp_overlap 6164789, overlap 6164790

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685