Motif View

Internal ID 18502087
Source Database TransTermHP TERM 1365
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1365
Sequence CGCCCCGGGGGGGCG
Look for more occurrences
Start 5975005
End 5975019
Strand +
Genomic Context
Replicon Pseudomonas mosselii SJ10, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCAGGCAAAAAAAA(5' tail) CGCCCC(5' stem) GGG(loop) GGGGCG(3' stem) TTTTTTCGTTTCAGC(3' tail). Confidence: 100. opp_overlap 5975005, overlap 5974998

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685