Motif View

Internal ID 18499725
Source Database TransTermHP TERM 526
Feature Type terminator
Name
Rho-independent transcription terminator TERM 526
Sequence TGACCCGTCCGGCCCCGCCCGGCCGGGCGGGGCA
Look for more occurrences
Start 1995183
End 1995216
Strand +
Genomic Context Located within gene [P797_RS09290]
Replicon Pseudomonas aeruginosa VRFPA04, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCAACCGTCCCGAT(5' tail) TGACCCGTCCGGCC(5' stem) CCGCCC(loop) GGCCGGGCGGGGCA(3' stem) TTGTGGAGAACGCTG(3' tail). Confidence: 91. overlap 1995194

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685