Motif View

Internal ID 18478463
Source Database TransTermHP TERM 63
Feature Type terminator
Name
Rho-independent transcription terminator TERM 63
Sequence GGGCATGGAACTCCATTTCCATGCCC
Look for more occurrences
Start 194382
End 194407
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_15, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCATTCAGCCGACAA(5' tail) GGGCATGGAA(5' stem) CTCCAT(loop) TTCCATGCCC(3' stem) TTTGTTTTTATCCCG(3' tail). Confidence: 100. opp_overlap 194382

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685