Motif View

Internal ID 18425720
Source Database TransTermHP TERM 77
Feature Type terminator
Name
Rho-independent transcription terminator TERM 77
Sequence CACCGACGGCCCGCTTGCGGGCCGTCGGCG
Look for more occurrences
Start 281533
End 281562
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_8, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCGCAGCGCTGTAG(5' tail) CACCGACGGCCCG(5' stem) CTTG(loop) CGGGCCGTCGGCG(3' stem) TTTCCGGGGCGGCGA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685