Motif View

Internal ID 18424918
Source Database TransTermHP TERM 123
Feature Type terminator
Name
Rho-independent transcription terminator TERM 123
Sequence CGCGGCCGGTGCAGCGATGCACCGGCCGCG
Look for more occurrences
Start 472864
End 472893
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14891 AZPAE14891_contig_14, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTGCGGGTAAGACGA(5' tail) CGCGGCCGGTGCA(5' stem) TCGC(loop) TGCACCGGCCGCG(3' stem) CGGAGACTCAGGCCT(3' tail). Confidence: 100. overlap 472861

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685