Motif View

Internal ID 18418437
Source Database TransTermHP TERM 7
Feature Type terminator
Name
Rho-independent transcription terminator TERM 7
Sequence GCCCCGCAGATGCGGGGC
Look for more occurrences
Start 19099
End 19116
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_43, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACGTTGATCGTAGA(5' tail) GCCCCGC(5' stem) AGAT(loop) GCGGGGC(3' stem) TTTTTCATGCGAACC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685