Motif View

Internal ID 18418344
Source Database TransTermHP TERM 15
Feature Type terminator
Name
Rho-independent transcription terminator TERM 15
Sequence GGGCGCGGTCCGCCGCCGGGCCGCGCCG
Look for more occurrences
Start 81556
End 81583
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_34, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGGACGGGGGGAAA(5' tail) CGGCGCGGCCCG(5' stem) GCGG(loop) CGGACCGCGCCC(3' stem) TCGGCTTCAGCGGTA(3' tail). Confidence: 90. overlap 81557

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685