| Internal ID | 18404931 | Source Database | TransTermHP TERM 55 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 55
|
| Sequence |
GATGGAACGAAGAACCCCGGCCATGAGCCGGGGTTCTTCGTTCCGGA Look for more occurrences |
| Start | 187442 |
| End | 187488 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACGCGCGCCGCCTGC(5' tail) GATGGAACGAAGAACCCCGGC(5' stem) CATGA(loop) GCCGGGGTTCTTCGTTCCGGA(3' stem) TTGCTGAAAGCGATA(3' tail). Confidence: 100. opp_overlap 187449 187453 187456, overlap 187453 187456 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|