Motif View

Internal ID 18402766
Source Database TransTermHP TERM 37
Feature Type terminator
Name
Rho-independent transcription terminator TERM 37
Sequence GGCGAAGCCATCCGGCTTCGCC
Look for more occurrences
Start 124985
End 125006
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGTGGAGAAAAAA(5' tail) GGCGAAGCC(5' stem) ATCC(loop) GGCTTCGCC(3' stem) TTTTTCGTTTCTGCG(3' tail). Confidence: 100. opp_overlap 124985

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685