| Internal ID | 18401443 | Source Database | TransTermHP TERM 80 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 80
|
| Sequence |
CGAAGAACCCCGGCTCATGGCCGGGGTTCTTCG Look for more occurrences |
| Start | 366182 |
| End | 366214 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_9, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTCAGCAATCCGTAA(5' tail) CGAAGAACCCCGGCT(5' stem) CAT(loop) GGCCGGGGTTCTTCG(3' stem) TTCCATCGCAGGCGG(3' tail). Confidence: 100. opp_overlap 366186 366189, overlap 366186 366189 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|