| Internal ID | 18393371 | Source Database | TransTermHP TERM 119 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 119
|
| Sequence |
GACGAAGGCCACCGCCTCACAGCGGTGGCCTTCGTC Look for more occurrences |
| Start | 418144 |
| End | 418179 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE15032 AZPAE15032_contig_1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGGATGCGATAGAAC(5' tail) GACGAAGGCCACCGC(5' stem) TGTGAG(loop) GCGGTGGCCTTCGTC(3' stem) CTGGAACTCAGAAAA(3' tail). Confidence: 100. opp_overlap 418150, overlap 418143 418146 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|