| Internal ID | 18383524 | Source Database | TransTermHP TERM 78 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 78
|
| Sequence |
GAAAAACCCGGCTCAGGCCGGGTTTTTC Look for more occurrences |
| Start | 278842 |
| End | 278869 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_1_Average_coverage:_84.89, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGCTGAGCCTCTAAG(5' tail) GAAAAACCCGGC(5' stem) TCAG(loop) GCCGGGTTTTTC(3' stem) TTTGCCTGGAAAAAG(3' tail). Confidence: 100. opp_overlap 278848, overlap 278848 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|