Motif View

Internal ID 18356049
Source Database TransTermHP TERM 35
Feature Type terminator
Name
Rho-independent transcription terminator TERM 35
Sequence CCCGGCCTGAGCCGGG
Look for more occurrences
Start 95054
End 95069
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14988 AZPAE14988_contig_10, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCTCTAAGGAAAAA(5' tail) CCCGGC(5' stem) TCAG(loop) GCCGGG(3' stem) TTTTTCTTTGCCTGG(3' tail). Confidence: 100. opp_overlap 95054 95048

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685