Motif View

Internal ID 18349824
Source Database TransTermHP TERM 64
Feature Type terminator
Name
Rho-independent transcription terminator TERM 64
Sequence GCCCGCCTTGCGCGGGC
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Start 233792
End 233808
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_9, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACAGGCATGAAAAA(5' tail) GCCCGC(5' stem) GCAAG(loop) GCGGGC(3' stem) TTCTTCGCAAGCGCT(3' tail). Confidence: 100. opp_overlap 233792

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685