| Internal ID | 18349659 | Source Database | TransTermHP TERM 1 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1
|
| Sequence |
CAGGAACGCCGGCTATCGCCGGCGTTCTTG Look for more occurrences |
| Start | 2217 |
| End | 2246 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_48, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGCCGGGGCTAGACG(5' tail) CAGGAACGCCGGC(5' stem) TATC(loop) GCCGGCGTTCTTG(3' stem) TTTGCGCGTTCCTCA(3' tail). Confidence: 100. opp_overlap 2223, overlap 2220 2223 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|