Motif View

Internal ID 18328218
Source Database TransTermHP TERM 68
Feature Type terminator
Name
Rho-independent transcription terminator TERM 68
Sequence CGGCGCTGCGCGCGATCCGCCAGGAGCGCTCGCAGCGCCG
Look for more occurrences
Start 151123
End 151162
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_6, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGGCGGTCGAATA(5' tail) CGGCGCTGCGAGCGCTCC(5' stem) TGGC(loop) GGATCGCGCGCAGCGCCG(3' stem) TTCTGGAACACGGGC(3' tail). Confidence: 100. opp_overlap 151123

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685