| Internal ID | 18328156 | Source Database | TransTermHP TERM 46 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 46
|
| Sequence |
GGACGAAGGCCACCGCCTCACAGCGGTGGCCTTCGTCG Look for more occurrences |
| Start | 221618 |
| End | 221655 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_5, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTTTTCTGAGTTCCA(5' tail) GGACGAAGGCCACCGC(5' stem) CTCACA(loop) GCGGTGGCCTTCGTCG(3' stem) TTCTATCGCATCCGT(3' tail). Confidence: 100. opp_overlap 221625, overlap 221619 221621 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|