Motif View

Internal ID 18321132
Source Database TransTermHP TERM 13
Feature Type terminator
Name
Rho-independent transcription terminator TERM 13
Sequence GGAAACCCCGGCCTGGCGCCGGGGTTTTC
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Start 35071
End 35099
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE15055 AZPAE15055_contig_4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TACCTGACGCAAAAA(5' tail) GAAAACCCCGGC(5' stem) GCCAG(loop) GCCGGGGTTTCC(3' stem) ATGAGGGTCGGTCTG(3' tail). Confidence: 100. opp_overlap 35076, overlap 35076

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685