Motif View

Internal ID 18320726
Source Database TransTermHP TERM 73
Feature Type terminator
Name
Rho-independent transcription terminator TERM 73
Sequence CGGAAAAGGCCGCCTAGCGGCCTTTTTTG
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Start 182181
End 182209
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE15055 AZPAE15055_contig_17, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATCGTACAGAGAAAA(5' tail) CAAAAAAGGCCGC(5' stem) TAG(loop) GCGGCCTTTTCCG(3' stem) GAGAACGATGACTCA(3' tail). Confidence: 100. opp_overlap 182188, overlap 182188

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685