Motif View

Internal ID 18285685
Source Database TransTermHP TERM 76
Feature Type terminator
Name
Rho-independent transcription terminator TERM 76
Sequence CGGGGCGGCTATAATCGCCGCCCCG
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Start 245181
End 245205
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14935 AZPAE14935_contig_4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGGCAGCGGGAAAA(5' tail) CGGGGCGGCGA(5' stem) TTA(loop) TAGCCGCCCCG(3' stem) CAGGCATCGGAAAGC(3' tail). Confidence: 100. overlap 245197

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685