| Internal ID | 18285574 | Source Database | TransTermHP TERM 49 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 49
|
| Sequence |
CGAAAAAGGCCGGCGAATGCCGGCCTTTTTCA Look for more occurrences |
| Start | 177583 |
| End | 177614 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14935 AZPAE14935_contig_3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGTCCGTGCGATCCA(5' tail) CGAAAAAGGCCGGC(5' stem) GAAT(loop) GCCGGCCTTTTTCA(3' stem) TTCTCGCCTCAGTGC(3' tail). Confidence: 91. opp_overlap 177590, overlap 177584 177590 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|