Motif View

Internal ID 18285203
Source Database TransTermHP TERM 7
Feature Type terminator
Name
Rho-independent transcription terminator TERM 7
Sequence GGCGCCTTCGGGCGCC
Look for more occurrences
Start 42093
End 42108
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14935 AZPAE14935_contig_14, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCCCAACGGGAAAA(5' tail) GGCGCC(5' stem) TTCG(loop) GGCGCC(3' stem) TTTTTTCATCCTGTG(3' tail). Confidence: 100. opp_overlap 42093

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685