Motif View

Internal ID 18233747
Source Database TransTermHP TERM 27
Feature Type terminator
Name
Rho-independent transcription terminator TERM 27
Sequence GGGCGGGCGGCTCCGGTCCGGCGCCGCCCGCCC
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Start 201903
End 201935
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_18, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTCGACGGAAGAAC(5' tail) GGGCGGGCGGCGCCG(5' stem) GAC(loop) CGGAGCCGCCCGCCC(3' stem) ATGCTCACACGGTGT(3' tail). Confidence: 100. overlap 201902

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685