Motif View

Internal ID 18233739
Source Database TransTermHP TERM 10
Feature Type terminator
Name
Rho-independent transcription terminator TERM 10
Sequence TGCCGAAGTCCCGGCA
Look for more occurrences
Start 91188
End 91203
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_18, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTGACAGGGAAAAAA(5' tail) TGCCG(5' stem) GGACTT(loop) CGGCA(3' stem) CAACGCACCTCGGCA(3' tail). Confidence: 90.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685